SCnorm Vignette1 years ago
1 Introduction | 2 Run SCnorm | 3 SCnorm: Multiple Conditions | 4 SCnorm: UMI data | 5 Spike-ins | 6 Within-sample normalization | 7 Session info | 8 Frequently Asked Questions
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Using methylscaper to visualize joint methylation and nucleosome occupancy data2 years ago
Introduction | Getting Started | Installation | Load the package | Visualizing single-cell data | Example data for single-cell data | Preprocessing in the Shiny app | Preprocessing using methylscaper functions | Visualization in the Shiny app | Visualization using methylscaper functions | Accessing gene positions via biomaRt objects | Visualizing single-molecule data | Visualization in the Shiny app | Visualization using the methylscaper functions | Additional summary plots | FAQ | SessionInfo
Trendy Vignette7 years ago
1 Overview | 2 Installation | 3 Analysis | 4 More advanced analysis | 5 Trendy shiny app | 6 SessionInfo